Removes overlapping regimens from alignment output
removeOverlaps.RdTwo overlap removal steps are performed: #' 1. Remove overlaps between regimens with different names #' 2. Remove overlaps between regimens with different number of components
removeOverlaps.RdTwo overlap removal steps are performed: #' 1. Remove overlaps between regimens with different names #' 2. Remove overlaps between regimens with different number of components