Filter a stringDF dataframe to contain only valid patients

Filter a stringDF dataframe to contain only valid patients

Usage

writeOutputs(
  output_all,
  processedAll,
  processedEras,
  regGroups,
  regStats,
  connectionDetails,
  cdmSchema,
  con_df,
  stringDF,
  skipSummaryStats = FALSE
)

Arguments

output_all

A dataframe containing raw outputs

processedAll

A dataframe containing processed output regimens

processedEras

A dataframe containing processed regimen eras

regGroups

The desired regimen grouping variables for Sankey construction

regStats

A dataframe containing various summary statistics

connectionDetails

A set of DatabaseConnector connectiondetails

cdmSchema

A schema containing a valid OMOP CDM

con_df

The con dataframe object generated by getCohortSet

stringDF

A stringDF object containing all valid patients (i.e., those who have exposure to at least one valid drug)

skipSummaryStats

A toggle indicating whether or not the user wishes to skip generating additional summary statistics