Export SCCSresults to CSV files
Usage
exportToCsv(
outputFolder,
exportFolder = file.path(outputFolder, "export"),
databaseId = 1,
minCellCount = 5,
maxCores = 1
)
Arguments
- outputFolder
The folder where runCmAnalyses() generated all results.
- exportFolder
The folder where the CSV files will written.
- databaseId
A unique ID for the database. This will be appended to most tables.
- minCellCount
To preserve privacy: the minimum number of subjects contributing to a count before it can be included in the results. If the count is below this threshold, it will be set to
-minCellCount
.- maxCores
Maximum number of CPU cores to use.
Value
Does not return anything. Is called for the side-effect of populating the exportFolder
with CSV files.
Details
This requires that runSccsAnalyses()
has been executed first. It exports
all the results in the outputFolder
to CSV files for sharing with other
sites.