Requires the results data model tables have been created using the
Set the POSTGRES_PATH environmental variable to the path to the folder containing the psql executable to enable bulk upload (recommended).
forceOverWriteOfSpecifications = FALSE,
purgeSiteDataBeforeUploading = TRUE,
tempFolder = tempdir(),
tablePrefix = "",
An object of type
connectionDetails as created using the
createConnectionDetails function in the
The schema on the postgres server where the tables have been created.
The name of the zip file.
If TRUE, specifications of the phenotypes, cohort definitions, and analysis will be overwritten if they already exist on the database. Only use this if these specifications have changed since the last upload.
If TRUE, before inserting data for a specific databaseId all the data for that site will be dropped. This assumes the input zip file contains the full data for that data site.
A folder on the local file system where the zip files are extracted to. Will be cleaned up when the function is finished. Can be used to specify a temp folder on a drive that has sufficient space if the default system temp space is too limited.
(Optional) string to insert before table names (e.g. "cd_") for database table names