All functions

checkInputFileEncoding()

Check character encoding of input file

createDiagnosticsExplorerZip()

Create publishable shiny zip

createMergedResultsFile()

Merge Shiny diagnostics files into sqlite database

createResultsDataModel()

Create the results data model tables on a database server.

executeDiagnostics()

Execute cohort diagnostics

getCdmDataSourceInformation()

Returns information from CDM source table.

getCohortCounts()

Count the cohort(s)

getDataMigrator()

Get database migrations instance

getDefaultCovariateSettings()

Get default covariate settings

getDefaultVocabularyTableNames()

Get a list of vocabulary table names

getResultsDataModelSpecifications()

Get specifications for Cohort Diagnostics results data model

launchDiagnosticsExplorer()

Launch the Diagnostics Explorer Shiny app

migrateDataModel()

Migrate Data model

runCohortRelationshipDiagnostics()

Given a set of cohorts get relationships between the cohorts.

runCohortTimeSeriesDiagnostics()

Given a set of instantiated cohorts get time series for the cohorts.

uploadResults()

Upload results to the database server.