Package index

Create a cdm_reference

cdmFromPostgres()

Create a <cdm_reference> object from a postgres connection

Copy a cdm_reference to a postgres source

copyCdmToPostgres()

Copy a cdm (independently of its source) to a

Create empty OMOP CDM tables

createOmopTablesOnPostgres()

Title

Create and read logging files

postgresLog()

Start a postgres log

readPostgresLog()

Create a tibble from the log files in the logPath folder

Job management

Cancel and manage jobs.

getJobs()

Get ongoing Postgres jobs.

cancelJob()

Cancel a Postgres job.

Index mangement

Create and check existing indexes.

reexports expectedIndexes existingIndexes statusIndexes createIndexes createTableIndex listSourceTables insertTable dropSourceTable insertCdmTo readSourceTable cdmDisconnect cdmTableFromSource compute

Objects exported from other packages

Create a postgres source object

postgresSource()

Create a postgres source object

CDM object managment

Reexported functions from other packages for the cdm_reference object management.

reexports expectedIndexes existingIndexes statusIndexes createIndexes createTableIndex listSourceTables insertTable dropSourceTable insertCdmTo readSourceTable cdmDisconnect cdmTableFromSource compute

Objects exported from other packages

Create a local postgres

Create a local postgres connection using environmental variables.

localPostgres()

This function creates a connection to the local postgres instance