Profile likelihood for Cyclops model parameters — getCyclopsProfileLogLikelihood • Cyclops

getCyclopsProfileLogLikelihood evaluates the profile likelihood at a grid of parameter values.

getCyclopsProfileLogLikelihood(
  object,
  parm,
  x = NULL,
  bounds = NULL,
  tolerance = 0.001,
  initialGridSize = 10,
  includePenalty = TRUE
)

Arguments

object: Fitted Cyclops model object
parm: Specification of which parameter requires profiling, either a vector of numbers of covariateId names
x: Vector of values of the parameter
bounds: Pair of values to bound adaptive profiling
tolerance: Absolute tolerance allowed for adaptive profiling
initialGridSize: Initial grid size for adaptive profiling
includePenalty: Logical: Include regularized covariate penalty in profile

A data frame containing the profile log likelihood. Returns NULL when the adaptive profiling fails to converge.