Reference

All functions

computePerformanceMetricsFromCounts()

Compute performance metrics based on a 2-by-2 counts table

createCreateEvaluationCohortArgs()

Create a parameter object for the function createEvaluationCohort

createDefaultCovariateSettings()

Create the default covariate settings

createEvaluationCohort()

Create the evaluation cohort

createPheValuatorAnalysis()

Create a PheValuator analysis specification

createTestPhenotypeAlgorithmArgs()

Create a parameter object for the function testPhenotypeAlgorithm

loadPheValuatorAnalysisList()

Load a list of phevaluatorAnalysis from file

runPheValuatorAnalyses()

Run a list of analyses

savePheValuatorAnalysisList()

Save a list of phevaluatorAnalysis to file

summarizePheValuatorAnalyses()

Summarize results of PheValuator analyses

testPhenotypeAlgorithm()

Test phenotype algorithms