Cohort Subset Definition — CohortSubsetDefinition • CohortGenerator

Set of subset definitions pretty in print

Active bindings

targetOutputPairs: list of pairs of integers - (targetCohortId, outputCohortId)
subsetOperators: list of subset operations
name: name of definition
subsetCohortNameTemplate: template string for formatting resulting cohort names
operatorNameConcatString: string used when concatenating operator names together
definitionId: numeric definition id
identifierExpression: expression that can be evaluated from

CohortSubsetDefinition$print(...)

CohortSubsetDefinition$new(definition = NULL)

List representation of object to JSON

CohortSubsetDefinition$toList()

json serialized representation of object add Subset Operator

CohortSubsetDefinition$toJSON()

add subset to class - checks if equivalent id is present Will throw an error if a matching ID is found but reference object is different

CohortSubsetDefinition$addSubsetOperator(subsetOperator)

subsetOperator: a SubsetOperator instance
overwrite: if a subset operator of the same ID is present, replace it with a new definition get query for a given target output pair

Returns vector of join, logic, having statements returned by subset operations

CohortSubsetDefinition$getSubsetQuery(targetOutputPair)

CohortSubsetDefinition$getSubsetCohortName(
  cohortDefinitionSet,
  targetOutputPair
)

cohortDefinitionSet: Cohort definition set containing base names
targetOutputPair: Target output pair Set the targetOutputPairs to be added to a cohort definition set

CohortSubsetDefinition$setTargetOutputPairs(targetIds)

targetIds: list of cohort ids to apply subsetting operations to Get json file name for subset definition in folder

CohortSubsetDefinition$getJsonFileName(
  subsetJsonFolder = "inst/cohort_subset_definitions/"
)

The objects of this class are cloneable with this method.

CohortSubsetDefinition$clone(deep = FALSE)