A function to extract the outcomes found in cohort method — getCmOutcomes • OhdsiReportGenerator

A function to extract the outcomes found in cohort method

Usage

getCmOutcomes(
  connectionHandler,
  schema,
  cmTablePrefix = "cm_",
  cgTablePrefix = "cg_",
  targetId = NULL
)

Arguments

connectionHandler: A connection handler that connects to the database and extracts sql queries. Create a connection handler via `ResultModelManager::ConnectionHandler$new()`.
schema: The result database schema (e.g., 'main' for sqlite)
cmTablePrefix: The prefix used for the cohort method results tables
cgTablePrefix: The prefix used for the cohort generator results tables
targetId: An integer corresponding to the target cohort ID

Value

A data.frame with the cohort method outcome ids and names.

Details

Specify the connectionHandler, the schema and the prefixes

See also

Other Estimation: getCMEstimation(), getCmDiagnosticsData(), getCmMetaEstimation(), getCmNegativeControlEstimates(), getCmPropensityModel(), getCmTable(), getCmTargets(), getSccsDiagnosticsData(), getSccsEstimation(), getSccsMetaEstimation(), getSccsModel(), getSccsNegativeControlEstimates(), getSccsOutcomes(), getSccsTable(), getSccsTargets(), getSccsTimeToEvent(), plotCmEstimates(), plotSccsEstimates()

Examples

conDet <- getExampleConnectionDetails()

connectionHandler <- ResultModelManager::ConnectionHandler$new(conDet)
#> Connecting using SQLite driver

outcomes <- getCmOutcomes(
  connectionHandler = connectionHandler, 
  schema = 'main'
)