Function reference • OhdsiShinyModules

OHDSI Shiny Modules Modules for OHDSI shiny apps.
`OhdsiShinyModules`	OhdsiShinyModules
`getLogoImage()`	The location of the OHDSI logo
About module Modules for the information page.
`aboutHelperFile()`	The location of the about module helper file
`aboutServer()`	The module server for the shiny app home
`aboutViewer()`	The module viewer for the shiny app home
Report module Modules for creating summary html report.
`reportHelperFile()`	The location of the report module helper file
`reportServer()`	The module server for the shiny app report module
`reportViewer()`	The module viewer for the shiny app report module
SCCS module Modules for viewing self controlled case series results.
`sccsHelperFile()`	The location of the description module helper file
`sccsServer()`	The module server for exploring SCCS
`sccsView()`	SCCS shiny module UI code
Prediction module Modules for prediction results.
`patientLevelPredictionCalibrationServer()`	The module server for exploring prediction validation results
`patientLevelPredictionCalibrationViewer()`	The module viewer for exploring prediction model calibration results
`patientLevelPredictionCovariateSummaryServer()`	The module server for exploring prediction covariate summary results
`patientLevelPredictionCovariateSummaryViewer()`	The module viewer for exploring prediction covariate summary results
`patientLevelPredictionCutoffServer()`	The module server for exploring prediction cut-off results
`patientLevelPredictionCutoffViewer()`	The module viewer for exploring prediction cut-off results
`patientLevelPredictionDesignSummaryServer()`	The module server for exploring prediction designs in the results
`patientLevelPredictionDesignSummaryViewer()`	The module viewer for exploring prediction designs that have been run
`patientLevelPredictionDiagnosticsServer()`	The module server for exploring prediction diagnostic results
`patientLevelPredictionDiagnosticsViewer()`	The module viewer for exploring prediction diagnostic results
`patientLevelPredictionDiscriminationServer()`	The module server for exploring prediction model discrimination results
`patientLevelPredictionDiscriminationViewer()`	The module viewer for exploring prediction model discrimination results
`patientLevelPredictionHelperFile()`	The location of the prediction module helper file
`patientLevelPredictionModelSummaryServer()`	The module server for exploring prediction summary results
`patientLevelPredictionModelSummaryViewer()`	The module viewer for exploring prediction summary results
`patientLevelPredictionNbServer()`	The module server for exploring prediction net-benefit results
`patientLevelPredictionNbViewer()`	The module viewer for exploring prediction net-benefit results
`patientLevelPredictionServer()`	The module server for exploring PatientLevelPrediction
`patientLevelPredictionSettingsServer()`	The module server for exploring prediction settings
`patientLevelPredictionSettingsViewer()`	The module viewer for exploring prediction settings
`patientLevelPredictionValidationServer()`	The module server for exploring prediction validation results
`patientLevelPredictionValidationViewer()`	The module viewer for exploring prediction validation results
`patientLevelPredictionViewer()`	The module viewer for exploring PatientLevelPrediction
Decription module Modules for the description analyses.
`characterizationAggregateFeaturesServer()`	The module server for exploring aggregate features results
`characterizationAggregateFeaturesViewer()`	The module viewer for exploring aggregate feature results
`characterizationDechallengeRechallengeServer()`	The module server for exploring Dechallenge Rechallenge results
`characterizationDechallengeRechallengeViewer()`	The module viewer for exploring Dechallenge Rechallenge results
`characterizationHelperFile()`	The location of the characterization module helper file
`characterizationIncidenceServer()`	The module server for exploring incidence results
`characterizationIncidenceViewer()`	The module viewer for exploring incidence results
`characterizationServer()`	The module server for exploring characterization studies
`characterizationTableServer()`	The module server for exploring 1 or more cohorts features
`characterizationTableViewer()`	The module viewer for exploring 1 or more cohorts features
`characterizationTimeToEventServer()`	The module server for exploring time to event results
`characterizationTimeToEventViewer()`	The module viewer for exploring time to event results
`characterizationViewer()`	The module viewer for exploring characterization studies
Cohort Generator module Modules for the cohort generator package.
`cohortGeneratorHelperFile()`	The location of the cohort-generator module helper file
`cohortGeneratorServer()`	The module server for the main cohort generator module
`cohortGeneratorViewer()`	The viewer of the main cohort generator module
Estimator module Modules for the CohortMethod package.
`cohortMethodAttritionServer()`	The module server for rendering the PLE attrition results
`cohortMethodAttritionViewer()`	The module viewer for rendering the PLE attrition results
`cohortMethodCovariateBalanceServer()`	The module server for rendering the covariate balance plot
`cohortMethodCovariateBalanceViewer()`	The module viewer for rendering the PLE covariate balance analysis
`cohortMethodDiagnosticsSummaryServer()`	The module server for rendering the PLE diagnostics summary
`cohortMethodDiagnosticsSummaryViewer()`	The module viewer for rendering the PLE diagnostics results
`cohortMethodHelperFile()`	The location of the cohort method module helper file
`cohortMethodKaplanMeierServer()`	The module server for rendering the Kaplan Meier curve
`cohortMethodKaplanMeierViewer()`	The module viewer for rendering the PLE Kaplan Meier curve
`cohortMethodPopulationCharacteristicsServer()`	The module server for rendering the population characteristics
`cohortMethodPopulationCharacteristicsViewer()`	The module viewer for rendering the PLE population characteristics
`cohortMethodPowerServer()`	The module server for rendering the PLE power analysis results
`cohortMethodPowerViewer()`	The module viewer for rendering the PLE power analysis
`cohortMethodPropensityModelServer()`	The module server for rendering the propensity score model
`cohortMethodPropensityModelViewer()`	The module viewer for rendering the PLE propensity score model covariates/coefficients
`cohortMethodPropensityScoreDistServer()`	The module server for rendering a PLE propensity score distribution
`cohortMethodPropensityScoreDistViewer()`	The module viewer for rendering the propensity score distribution
`cohortMethodResultSummaryServer()`	The module server for rendering the PLE diagnostics summary
`cohortMethodResultSummaryViewer()`	The module viewer for rendering the cohort method results
`cohortMethodServer()`	The module server for the main cohort method module
`cohortMethodSystematicErrorServer()`	The module server for rendering the systematic error objects
`cohortMethodSystematicErrorViewer()`	The module viewer for rendering the PLE systematic error objects
`cohortMethodViewer()`	The viewer of the main cohort method module
Data diagnostics module Modules for the DataDiagnostics package.
`dataDiagnosticDrillServer()`	The module server for exploring prediction summary results
`dataDiagnosticDrillViewer()`	The module viewer for exploring data-diagnostic results in more detail
`dataDiagnosticHelperFile()`	The location of the data-diagnostic module helper file
`dataDiagnosticServer()`	The module server for exploring data-diagnostic
`dataDiagnosticSummaryServer()`	The module server for exploring prediction summary results
`dataDiagnosticSummaryViewer()`	The module viewer for exploring data-diagnostic summary results
`dataDiagnosticViewer()`	The module viewer for exploring data-diagnostic
Cohort Diagnostics module Modules for the CohortDiagnostics package.
`cohortDiagCharacterizationView()`	characterization
`cohortDiagnosticsHelperFile()`	The location of the description module helper file
`cohortDiagnosticsServer()`	Cohort Diagnostics Explorer main module
`cohortDiagnosticsView()`	View for cohort diagnostics module
`cohortCountsModule()`	Shiny module for cohort counts
`cohortCountsView()`	Cohort Counts View
`cohortDefinitionsModule()`	Cohort Definition module
`cohortDefinitionsView()`	Cohort Definitions View
`cohortOverlapView()`	Cohort Overlap View
`compareCohortCharacterizationView()`	compare characterization view
`conceptsInDataSourceView()`	concepts In DataSource View
`createCdDatabaseDataSource()`	Create a CD data source from a database
`databaseInformationView()`	database Information View
`getCirceRenderedExpression()`	Returns list with circe generated documentation
`getEnabledCdReports()`	Get enable cd reports from available data
`incidenceRatesView()`	incidence Rates View
`indexEventBreakdownView()`	Index event breakdown view
`orpahanConceptsView()`	Orphan Concepts View
`timeDistributionsView()`	timeDistributions view
`visitContextView()`	Visit context module view
`inclusionRulesView()`	inclusion Rules View
Components module Modules for the component functions shared across modules.
`createCustomColDefList()`	Creating a list of custom column definitions for use in reactables
`createLargeSqlQueryDt()`	Create Large Sql Query Data Table
`LargeDataTable`	Large Data Table
`largeTableView()`	Large Table Component Viewer
`largeTableServer()`	Large Table Component Server
`makeButtonLabel()`	Make a label for an html button
`resultTableServer()`	Result Table Server
`resultTableViewer()`	Result Table Viewer
Data sources module Modules for the data sources results.
`datasourcesHelperFile()`	Define the helper file for the module
`datasourcesServer()`	The server function for the datasources module
`datasourcesViewer()`	The viewer function for hte datasources module
Evidence synthesis module Modules for the evidence synthesis (Meta) analysis results.
`evidenceSynthesisHelperFile()`	The location of the evidence synthesis module helper file
`evidenceSynthesisServer()`	The module server for exploring PatientLevelPrediction
`evidenceSynthesisViewer()`	The module viewer for exploring evidence-synthesis
Home module Modules for the home page.
`homeHelperFile()`	The location of the home module helper file
`homeServer()`	The module server for exploring home
`homeViewer()`	The module viewer for exploring home
PheValuator module Modules for the PheValuator results.
`phevaluatorHelperFile()`	The location of the phevaluator module helper file
`phevaluatorServer()`	The module server for the main phevaluator module
`phevaluatorViewer()`	The viewer of the phevaluator module

Reference

OHDSI Shiny Modules

About module

Report module

SCCS module

Prediction module

Decription module

Cohort Generator module

Estimator module

Data diagnostics module

Cohort Diagnostics module

Components module

Data sources module

Evidence synthesis module

Home module

PheValuator module