Get a cohort definition set — getPlCohortDefinitionSet • PhenotypeLibrary

Get a cohort definition set

getPlCohortDefinitionSet(cohortIds)

Arguments

cohortIds: IDs of cohorts to extraction from the library.

Value

A tibble with the cohort ID, name, sql, and JSON for the provided cohort IDs. Can be used by the CohortGenerator package.

Examples

cohorts <- getPhenotypeLog()
subsetIds <- cohorts$cohortId[1:3]
getPlCohortDefinitionSet(subsetIds)
#> # A tibble: 3 × 4
#>   cohortId cohortName      json                                            sql  
#>      <dbl> <chr>           <chr>                                           <chr>
#> 1        3 Cough or Sputum "{\n\t\"cdmVersionRange\" : \">=5.0.0\",\n\t\"… "CRE…
#> 2        4 Diarrhea        "{\n\t\"cdmVersionRange\" : \">=5.0.0\",\n\t\"… "CRE…
#> 3        5 Dyspnea         "{\n\t\"cdmVersionRange\" : \">=5.0.0\",\n\t\"… "CRE…