Changelog • OmopSketch

OmopSketch 0.5.1

CRAN release: 2025-06-19

CRAN release: 2025-06-18

Table top concept counts by @cecicampanile @catalamarti #392
summariseTableQuality function by @cecicampanile #396
specify arguments in examples and deprecate summariseConceptSetCounts by @cecicampanile #397
In summariseObservationPeriod age computed after trimming to the study period by @cecicampanile #403
summariseInObservation refactoring by @cecicampanile #390
fixed warnings in tests by @cecicampanile #399shinyCharacteristics() function by @cecicampanile #401
observation period functions to work with temp tables by @cecicampanile #400
eunomia vocabulary in mockOmopSketch.R by @cecicampanile #398
tableQuality() function by @cecicampanile #406
summariseTableQuality in databaseCharacteristics() by @cecicampanile #407
use shinyCharacteristics() to generate the shiny deployed in the website by @cecicampanile #415
Improve tableClinicalRecords.R by @cecicampanile #417
Documentation by @cecicampanile #416

CRAN release: 2025-05-15

“sex” and “age” output in summariseInObservation by @cecicampanile #358
source concept in summariseConceptIdCount and tableConceptIdCounts by @cecicampanile #362t
ableInObservation and tableRecordCount by @cecicampanile #363
databaseCharacteristics() function by @cecicampanile #330
Table Record Count and In Observation by @cecicampanile #363
Add new examples by @elinrow #376Vignette explaining missing data functions by @elinrow #375
Update “Summarise observation period” vignette by @cecicampanile #377
Update “Summarise clinical tables records” by @cecicampanile #378
Create shiny app with characterisation of synthetic data by @catalamarti #381
“Summarise concept count” vignette by @cecicampanile #379
Update vocabulary version in summariseOmopSnapshot() by @cecicampanile #383

CRAN release: 2025-04-14

remove dplyr::compute() from sampleOmopTable() by @cecicampanile #344
option to summarise by person in summariseInObservation by @cecicampanile #345
counts of 0 in summariseMissingData by @cecicampanile #346
x ax ordered by observation period ordinal in plotObservationPeriod by @cecicampanile #348
byOrdinal boolean argument in summariseObservationPeriod by @cecicampanile #349
bug that was showing percentages over 100 fixed in summariseClinicalRecords by @cecicampanile #350

CRAN release: 2025-03-16

remove dplyr::collect() from summariseClinicalRecords() by @cecicampanile #328
bug with time_interval fixed in summariseMissingData() by @cecicampanile #335
improved tableConceptIdCounts by @cecicampanile #336
arranged variable_name and variable_level in tableClinicalRecords by @cecicampanile #337

CRAN release: 2025-03-04

eunomiaIsAvailable instead of the deprecated eunomia_is_available by @cecicampanile #316
Account for int64 in summariseInObservation by @cecicampanile #312
Add “datatable” as possible table type by @cecicampanile #314
Interval argument in summariseMissingData and summariseConceptIdCounts, year argument deprecated by @cecicampanile #317
Only records in observation are accounted in summariseConceptIdCounts and summariseConceptSetCounts by @cecicampanile #319
vignette with full characterisation and shiny by @cecicampanile #325
in summariseInObservation and summariseObservationPeriod study range is now applied with cohortConstructor::trimToDateRange instead of requireInDateRange by @cecicampanile #325