
Set cohort end date to the last of a set of column dates
Source:R/exitAtColumnDate.R
exitAtLastDate.RdexitAtLastDate() resets cohort end date based on a set of specified
column dates. The last date that occurs is chosen.
Usage
exitAtLastDate(
cohort,
dateColumns,
cohortId = NULL,
returnReason = FALSE,
keepDateColumns = TRUE,
name = tableName(cohort),
.softValidation = FALSE
)Arguments
- cohort
A cohort table in a cdm reference.
- dateColumns
Character vector indicating date columns in the cohort table to consider.
- cohortId
Vector identifying which cohorts to modify (cohort_definition_id or cohort_name). If NULL, all cohorts will be used; otherwise, only the specified cohorts will be modified, and the rest will remain unchanged.
- returnReason
If TRUE it will return a column indicating which of the
dateColumnswas used.- keepDateColumns
If TRUE the returned cohort will keep columns in
dateColumns.- name
Name of the new cohort table created in the cdm object.
- .softValidation
Whether to perform a soft validation of consistency. If set to FALSE four additional checks will be performed: 1) a check that cohort end date is not before cohort start date, 2) a check that there are no missing values in required columns, 3) a check that cohort duration is all within observation period, and 4) that there are no overlapping cohort entries
Examples
# \donttest{
library(CohortConstructor)
library(PatientProfiles)
if(isTRUE(omock::isMockDatasetDownloaded("GiBleed"))){
cdm <- mockCohortConstructor()
cdm$cohort1 <- cdm$cohort1 |>
addTableIntersectDate(tableName = "observation", nameStyle = "next_obs", order = "first") |>
addFutureObservation(futureObservationType = "date", name = "cohort1")
cdm$cohort1 |>
exitAtLastDate(dateColumns = c("next_obs", "future_observation"))
}
# }